Package: GoMiner
Version: 1.3
Date: 2025-06-04
Title: Automate the Mapping Between a List of Genes and Gene Ontology
        Categories
Authors@R: c(
          person("Barry", "Zeeberg", email = "barryz2013@gmail.com",
                role = c("aut", "cre")))
Maintainer: Barry Zeeberg <barryz2013@gmail.com>
Author: Barry Zeeberg [aut, cre]
Depends: R (>= 4.2.0)
Imports: minimalistGODB, HGNChelper, randomGODB, stats, gplots,
        grDevices, utils, vprint
LazyData: true
LazyDataCompression: xz
Description: In gene-expression microarray studies, for example, one
        generally obtains a list of dozens or hundreds of genes that
        differ in expression between samples and then asks 'What does
        all of this mean biologically?' Alternatively, gene lists can
        be derived conceptually in addition to experimentally. For
        instance, one might want to analyze a group of genes known as
        housekeeping genes. The work of the Gene Ontology (GO)
        Consortium <geneontology.org> provides a way to address that
        question. GO organizes genes into hierarchical categories based
        on biological process, molecular function and subcellular
        localization. The role of 'GoMiner' is to automate the mapping
        between a list of genes and GO, and to provide a statistical
        summary of the results as well as a visualization.
License: GPL (>= 2)
Encoding: UTF-8
VignetteBuilder: knitr
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
RoxygenNote: 7.3.2
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2026-06-09 07:14:19 UTC; root
Repository: https://barryzee.r-universe.dev
Date/Publication: 2025-06-05 23:10:02 UTC
RemoteUrl: https://github.com/cran/GoMiner
RemoteRef: HEAD
RemoteSha: 0a6433fd9c6f3548d0c451a1c64a73dbb8b91c71