Package: HTGM3D
Version: 1.0.3
Date: 2026-04-26
Title: Three Dimensional High Throughput 'GoMiner'
Authors@R: c(
          person("Barry", "Zeeberg", email = "barryz2013@gmail.com",
                role = c("aut", "cre")))
Maintainer: Barry Zeeberg <barryz2013@gmail.com>
Author: Barry Zeeberg [aut, cre]
Depends: R (>= 4.2.0)
Imports: minimalistGODB, GoMiner, HTGM, HTGM2D, grDevices, stats,
        R2HTML, rgl, vprint, randomGODB, stringr, salesforcer
LazyData: true
LazyDataCompression: xz
Description: The Gene Ontology (GO) Consortium
        <https://geneontology.org/> organizes genes into hierarchical
        categories based on biological process (BP), molecular function
        (MF) and cellular component (CC, i.e., subcellular
        localization). Tools such as 'GoMiner' (see Zeeberg, B.R.,
        Feng, W., Wang, G. et al. (2003) <doi:10.1186/gb-2003-4-4-r28>)
        can leverage GO to perform ontological analysis of microarray
        and proteomics studies, typically generating a list of
        significant functional categories. To capture the benefit of
        all three ontologies, I developed 'HTGM3D', a three-dimensional
        version of 'GoMiner'.
License: GPL (>= 2)
Encoding: UTF-8
VignetteBuilder: knitr
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
RoxygenNote: 7.3.3
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2026-07-04 05:14:54 UTC; root
Config/pak/sysreqs: cmake libfreetype6-dev libglu1-mesa-dev make
        texlive libicu-dev libpng-dev libuv1-dev libxml2-dev
        libgl1-mesa-dev libssl-dev libx11-dev zlib1g-dev
Repository: https://barryzee.r-universe.dev
Date/Publication: 2026-04-26 19:15:59 UTC
RemoteUrl: https://github.com/cran/HTGM3D
RemoteRef: HEAD
RemoteSha: fb7eab79fa61c3b366fd166442f835152d151027